hjdai 


  • 56,808 total downloads
  • last updated 10/13/2018
  • Latest version: 2.0.5.7
BigODM & IASL biomedical text mining core library.
  • 13,993 total downloads
  • last updated 3/5/2018
  • Latest version: 1.0.2.1
Provide a BioCAsciiKeyReader which transform the BioC-XML file into a C# object that enables BioC-compatible modules to access the article content in an arbitrary sequence based on section headings.
  • 12,724 total downloads
  • last updated 8/17/2016
  • Latest version: 4.1.0.1
LingPipe is tool kit for processing text using computational linguistics. LingPipe is used to do tasks like: - Find the names of people, organizations or locations in news - Automatically classify Twitter search results into categories - Suggest correct spellings of queries
  • 10,046 total downloads
  • last updated 8/17/2016
  • Latest version: 0.3.12.4
The ExtractAbbrev class implements a simple algorithm for extraction of abbreviations and their definitions from biomedical text. Abbreviations (short forms) are extracted from the input file, and those abbreviations for which a definition (long form) is found are printed out, along with that... More information
  • 9,707 total downloads
  • last updated 3/13/2017
  • Latest version: 2008.6.24.23
The algorithms and corpora maintained here were developed by John Wilbur's group in the Computational Biology Branch of the NCBI. They are designed to support core NLP tasks in the biomedical domain including: Part of Speech Tagging Sentence Segmentation Grammatical Analysis and Parsing Named... More information
  • 7,113 total downloads
  • last updated 7/6/2017
  • Latest version: 0.5.7.6
  • CRF
CRF++ CLR version (x86/x64)
  • 6,866 total downloads
  • last updated 3/13/2017
  • Latest version: 1.0.0.6
  • MedicalNLP
The library contains tmuClinicl.NET types for implmenting the record format classification for discharge summaries.
  • 6,719 total downloads
  • last updated 5/19/2018
  • Latest version: 0.3.2.4
  • NLP Social Media
TwitterNLP provides a fast and robust Java-based tokenizer and part-of-speech tagger for tweets, its training data of manually labeled POS annotated tweets, a web-based annotation tool, and hierarchical word clusters from unlabeled tweets.
  • 5,782 total downloads
  • last updated 8/17/2016
  • Latest version: 4.1.4.2
Woodstox is a high-performance validating namespace-aware StAX-compliant (JSR-173) Open Source XML-processor written in Java.
  • 4,846 total downloads
  • last updated 3/13/2017
  • Latest version: 1.0.0.5
  • MedicalNLP
The library contains fundamental classes and base classes that define commonly-used value and reference data types, abstract classes, and attributes for implmenting the risk factor recognition and time attribute assigner for the i2b2 2014 shared task track 2.
BioC by: hjdai
  • 4,794 total downloads
  • last updated 8/16/2016
  • Latest version: 1.0.2
BioC is a simple format to share text data and annotations. It allows a large number of different annotations to be represented. We provide simple code to hold this data, read it and write it back to XML, and perform some sample processing.