Indigo.Net
1.4.0-beta.12
This is a prerelease version of Indigo.Net.
There is a newer version of this package available.
See the version list below for details.
See the version list below for details.
dotnet add package Indigo.Net --version 1.4.0-beta.12
NuGet\Install-Package Indigo.Net -Version 1.4.0-beta.12
This command is intended to be used within the Package Manager Console in Visual Studio, as it uses the NuGet module's version of Install-Package.
<PackageReference Include="Indigo.Net" Version="1.4.0-beta.12" />
For projects that support PackageReference, copy this XML node into the project file to reference the package.
paket add Indigo.Net --version 1.4.0-beta.12
The NuGet Team does not provide support for this client. Please contact its maintainers for support.
#r "nuget: Indigo.Net, 1.4.0-beta.12"
#r directive can be used in F# Interactive and Polyglot Notebooks. Copy this into the interactive tool or source code of the script to reference the package.
// Install Indigo.Net as a Cake Addin
#addin nuget:?package=Indigo.Net&version=1.4.0-beta.12&prerelease
// Install Indigo.Net as a Cake Tool
#tool nuget:?package=Indigo.Net&version=1.4.0-beta.12&prerelease
The NuGet Team does not provide support for this client. Please contact its maintainers for support.
EPAM Indigo projects
Copyright (c) 2009 to present EPAM Systems Apache License version 2.0
Introduction
This repository includes:
- Bingo: Chemistry search engine for Oracle, Microsoft SQL Server and PostgreSQL databases
- Indigo: Universal cheminformatics library with bindings to .NET, Java and Python, and the following tools:
- Legio: GUI application for combinatorial chemistry
- ChemDiff: Visual comparison of two SDF or SMILES files
- indigo-depict: Molecule and reaction rendering utility
- indigo-cano: Canonical SMILES generator
- indigo-deco: R-Group deconvolution utility
Detailed documentation is available at http://lifescience.opensource.epam.com
Download
https://lifescience.opensource.epam.com/download/indigo/index.html
Bindings:
- .NET: https://www.nuget.org/packages/Indigo.Net
- Java: https://search.maven.org/search?q=g:com.epam.indigo
- Python: https://pypi.org/project/epam.indigo/
Source code organization
Main directory structure layout:
- api: Indigo API sources
- bingo: Bingo sources
- build_scripts: CMake and python scripts for building all the sources
- third_party: sources for third-party libraries
- utils: utilities sources
- common|graph|layout|molecule|reaction|render2d: indigo-core sources
Each project is placed in the corresponding directory with CMakeList.txt configuration file, that does not include other projects. In order to build the whole project with the correct references you need to use CMake configurations from the build_scripts directory.
Build instructions
All the CMake projects are placed in build_scripts directories. You can use them manually,
or execute preconfigured scripts that does all the job.
Bingo build instructions
To generate project configuration, build the source code, and create the archives for
installation you need to execute build_scripts/bingo-release.py:
python build_scripts/bingo-release.py --preset=linux32 --dbms=[postgres|oracle|sqlserver]
The are different cmake presets: linux32, linux64, win32, win64, mac10.7 (and also all later mac10.x versions)
Indigo build instructions
To generate project configuration, build the source code, and create the archives for
installation you need to execute build_scripts/indigo-release-libs.py and
build_scripts/indigo-release-utils.py:
Linux (GCC 4.9+ or Clang 3.5+)
APT-based requirements (Debian or Ubuntu):
sudo apt install cmake libfreetype6-dev libfontconfig1-dev
RPM-based requirements (RedHat, CentOS, Fedora): install Developer Toolset if your OS does not have GCC 4.9+ and then install dependencies:
sudo yum install cmake freetype-devel fontconfig-devel
Build libraries and utils:
python build_scripts/indigo-release-libs.py --preset=linux64
python build_scripts/indigo-release-utils.py --preset=linux64
Windows (Microsoft Visual Studio 2013+ or MinGW with GCC version 4.9+)
python build_scripts/indigo-release-libs.py --preset=win64-2013
python build_scripts/indigo-release-utils.py --preset=win64-2013
Mac OS (Clang 3.5+)
python build_scripts/indigo-release-libs.py --preset=mac10.14
python build_scripts/indigo-release-utils.py --preset=mac10.14
Other
There are different cmake presets:
- win32-2013, win64-2013: Visual Studio 2013
- win32-2015, win64-2015: Visual Studio 2015
- win32-2017, win64-2017: Visual Studio 2017
- win32-2019, win64-2019: Visual Studio 2019
- win32-mingw: MinGW
- win64-mingw: MinGW-w64
- linux32, linux64: GCC or Clang on Linux with C++11 support
- linux32-universal, linux64-universal: GCC on Linux with statically linked libstdc++ for using on older Linux systems without C++11 support
- mac10.7, mac10.8, mac10.9, mac10.10, mac10.11, mac10.12, mac10.12, mac10.13, mac10.14, mac10.15: target Mac OS X or macOS
- mac-universal: targeting Mac OS X 10.7 as first version with C++11 support, should work on all Mac OS X 10.7+ systems
Wrappers
To generate Java, C#, or Python wrappers after build the binaries you need to execute
python build_scripts/indigo-make-by-libs.py --type=java
Available types: java, dotnet, python
| Product | Versions Compatible and additional computed target framework versions. |
|---|---|
| .NET | net5.0 was computed. net5.0-windows was computed. net6.0 was computed. net6.0-android was computed. net6.0-ios was computed. net6.0-maccatalyst was computed. net6.0-macos was computed. net6.0-tvos was computed. net6.0-windows was computed. net7.0 was computed. net7.0-android was computed. net7.0-ios was computed. net7.0-maccatalyst was computed. net7.0-macos was computed. net7.0-tvos was computed. net7.0-windows was computed. net8.0 was computed. net8.0-android was computed. net8.0-browser was computed. net8.0-ios was computed. net8.0-maccatalyst was computed. net8.0-macos was computed. net8.0-tvos was computed. net8.0-windows was computed. |
| .NET Core | netcoreapp2.0 was computed. netcoreapp2.1 was computed. netcoreapp2.2 was computed. netcoreapp3.0 was computed. netcoreapp3.1 was computed. |
| .NET Standard | netstandard2.0 is compatible. netstandard2.1 was computed. |
| .NET Framework | net461 was computed. net462 was computed. net463 was computed. net47 was computed. net471 was computed. net472 was computed. net48 was computed. net481 was computed. |
| MonoAndroid | monoandroid was computed. |
| MonoMac | monomac was computed. |
| MonoTouch | monotouch was computed. |
| Tizen | tizen40 was computed. tizen60 was computed. |
| Xamarin.iOS | xamarinios was computed. |
| Xamarin.Mac | xamarinmac was computed. |
| Xamarin.TVOS | xamarintvos was computed. |
| Xamarin.WatchOS | xamarinwatchos was computed. |
Compatible target framework(s)
Included target framework(s) (in package)
Learn more about Target Frameworks and .NET Standard.
-
.NETStandard 2.0
- System.Drawing.Common (>= 4.7.0)
NuGet packages (2)
Showing the top 2 NuGet packages that depend on Indigo.Net:
| Package | Downloads |
|---|---|
|
Sds.SdfParser
Sdf file reader |
|
|
Sds.CdxParser
CDX file reader |
GitHub repositories
This package is not used by any popular GitHub repositories.
| Version | Downloads | Last updated |
|---|---|---|
| 1.21.0-dev.2 | 77 | 4/22/2024 |
| 1.20.0-rc.1 | 74 | 4/15/2024 |
| 1.20.0-dev.1 | 61 | 3/15/2024 |
| 1.19.0-rc.3 | 62 | 4/2/2024 |
| 1.19.0-rc.2 | 66 | 3/22/2024 |
| 1.19.0-rc.1 | 76 | 3/14/2024 |
| 1.19.0-dev.1 | 79 | 3/7/2024 |
| 1.18.0 | 791 | 2/29/2024 |
| 1.18.0-rc.9 | 89 | 2/27/2024 |
| 1.18.0-rc.8 | 119 | 2/22/2024 |
| 1.18.0-rc.7 | 107 | 2/13/2024 |
| 1.18.0-rc.6 | 55 | 2/5/2024 |
| 1.18.0-rc.5 | 64 | 1/26/2024 |
| 1.18.0-rc.4 | 55 | 1/22/2024 |
| 1.18.0-rc.3 | 62 | 1/16/2024 |
| 1.18.0-rc.2 | 58 | 1/16/2024 |
| 1.18.0-rc.1 | 62 | 1/12/2024 |
| 1.18.0-dev.5 | 48 | 2/2/2024 |
| 1.18.0-dev.4 | 87 | 1/11/2024 |
| 1.18.0-dev.3 | 84 | 1/8/2024 |
| 1.18.0-dev.2 | 99 | 1/3/2024 |
| 1.18.0-dev.1 | 140 | 12/16/2023 |
| 1.17.0 | 142 | 2/29/2024 |
| 1.17.0-rc.3 | 91 | 12/18/2023 |
| 1.17.0-rc.2 | 109 | 12/11/2023 |
| 1.17.0-rc.1 | 121 | 12/8/2023 |
| 1.16.0 | 172 | 1/29/2024 |
| 1.16.0-rc.3 | 102 | 12/13/2023 |
| 1.16.0-rc.2 | 135 | 11/24/2023 |
| 1.16.0-rc.1 | 92 | 11/9/2023 |
| 1.15.0-rc.2 | 125 | 10/30/2023 |
| 1.15.0-rc.1 | 108 | 10/23/2023 |
| 1.15.0-dev.5 | 72 | 10/23/2023 |
| 1.15.0-dev.4 | 116 | 10/19/2023 |
| 1.15.0-dev.3 | 112 | 10/17/2023 |
| 1.15.0-dev.2 | 103 | 10/16/2023 |
| 1.15.0-dev.1 | 100 | 10/12/2023 |
| 1.14.0 | 1,141 | 11/2/2023 |
| 1.14.0-rc.7 | 80 | 10/20/2023 |
| 1.14.0-rc.6 | 115 | 10/10/2023 |
| 1.14.0-rc.5 | 122 | 9/12/2023 |
| 1.14.0-rc.4 | 124 | 8/29/2023 |
| 1.14.0-rc.3 | 106 | 8/25/2023 |
| 1.14.0-rc.2 | 127 | 8/21/2023 |
| 1.14.0-rc.1 | 140 | 8/11/2023 |
| 1.13.0 | 363 | 9/27/2023 |
| 1.13.0-rc.1 | 137 | 7/18/2023 |
| 1.12.0 | 4,943 | 7/9/2023 |
| 1.12.0-rc.2 | 132 | 6/2/2023 |
| 1.12.0-rc.1 | 90 | 5/23/2023 |
| 1.11.0 | 347 | 6/7/2023 |
| 1.11.0-rc.1 | 139 | 4/18/2023 |
| 1.10.0 | 3,258 | 3/20/2023 |
| 1.10.0-rc.6 | 182 | 3/20/2023 |
| 1.10.0-rc.5 | 203 | 3/17/2023 |
| 1.10.0-rc.4 | 153 | 2/21/2023 |
| 1.10.0-rc.3 | 121 | 2/15/2023 |
| 1.10.0-rc.2 | 206 | 1/30/2023 |
| 1.10.0-rc.1 | 146 | 1/30/2023 |
| 1.9.0 | 564 | 1/30/2023 |
| 1.9.0-rc.4 | 138 | 1/17/2023 |
| 1.9.0-rc.3 | 116 | 1/13/2023 |
| 1.9.0-rc.2 | 115 | 12/26/2022 |
| 1.8.3 | 3,282 | 11/30/2022 |
| 1.8.2 | 493 | 11/25/2022 |
| 1.8.1 | 493 | 11/15/2022 |
| 1.8.0 | 532 | 11/3/2022 |
| 1.8.0-rc.2 | 120 | 10/20/2022 |
| 1.8.0-rc.1 | 106 | 10/14/2022 |
| 1.7.4 | 1,447 | 6/20/2022 |
| 1.7.3 | 626 | 6/17/2022 |
| 1.7.2 | 583 | 6/16/2022 |
| 1.7.0 | 1,269 | 5/26/2022 |
| 1.7.0-beta | 278 | 5/19/2022 |
| 1.6.1 | 761 | 12/29/2021 |
| 1.5.0 | 589 | 8/30/2021 |
| 1.4.3 | 10,815 | 12/29/2020 |
| 1.4.2 | 502 | 12/28/2020 |
| 1.4.1 | 658 | 11/25/2020 |
| 1.4.0-rc1 | 299 | 11/25/2020 |
| 1.4.0-beta.12 | 1,574 | 4/20/2020 |
| 1.4.0-beta | 2,794 | 10/11/2019 |
| 1.3.0-beta | 929 | 12/30/2016 |
| 1.2.3 | 3,344 | 5/18/2016 |
| 1.2.1 | 1,658 | 5/7/2015 |
| 1.1.12 | 1,353 | 4/6/2015 |
| 1.0.0 | 1,238 | 4/11/2015 |