BioFSharp 2.0.0-beta3

.NET Standard 2.0 .NET Framework 4.5
This is a prerelease version of BioFSharp.
There is a newer prerelease version of this package available.
See the version list below for details.
dotnet add package BioFSharp --version 2.0.0-beta3
NuGet\Install-Package BioFSharp -Version 2.0.0-beta3
This command is intended to be used within the Package Manager Console in Visual Studio, as it uses the NuGet module's version of Install-Package.
<PackageReference Include="BioFSharp" Version="2.0.0-beta3" />
For projects that support PackageReference, copy this XML node into the project file to reference the package.
paket add BioFSharp --version 2.0.0-beta3
#r "nuget: BioFSharp, 2.0.0-beta3"
#r directive can be used in F# Interactive and Polyglot Notebooks. Copy this into the interactive tool or source code of the script to reference the package.
// Install BioFSharp as a Cake Addin
#addin nuget:?package=BioFSharp&version=2.0.0-beta3&prerelease

// Install BioFSharp as a Cake Tool
#tool nuget:?package=BioFSharp&version=2.0.0-beta3&prerelease

BioFSharp aims to be a user-friendly library for Bioinformatics written in F#.
This is the core package that contains optimized biological datastructures
(For example aminoacdis, nucleotides, and sequences consisting of them) and core
bioinformatic algorithms (such as alignments or pattern search). BioFSharp has many
more to offer in its subnamespaces, so be sure to check them out!

Product Versions
.NET net5.0 net5.0-windows net6.0 net6.0-android net6.0-ios net6.0-maccatalyst net6.0-macos net6.0-tvos net6.0-windows net7.0 net7.0-android net7.0-ios net7.0-maccatalyst net7.0-macos net7.0-tvos net7.0-windows
.NET Core netcoreapp2.0 netcoreapp2.1 netcoreapp2.2 netcoreapp3.0 netcoreapp3.1
.NET Standard netstandard2.0 netstandard2.1
.NET Framework net45 net451 net452 net46 net461 net462 net463 net47 net471 net472 net48 net481
MonoAndroid monoandroid
MonoMac monomac
MonoTouch monotouch
Tizen tizen40 tizen60
Xamarin.iOS xamarinios
Xamarin.Mac xamarinmac
Xamarin.TVOS xamarintvos
Xamarin.WatchOS xamarinwatchos
Compatible target framework(s)
Additional computed target framework(s)
Learn more about Target Frameworks and .NET Standard.

NuGet packages (10)

Showing the top 5 NuGet packages that depend on BioFSharp:

Package Downloads

Read/write functions for various biological file formats


Machine learning with BioFSharp and CNTK.Net.


Open source bioinformatics and computational biology toolbox written in F#.


GPU parallelized functions from BioFSharp


Auxiliary functions for the course BIO-BTE-06-L-7

GitHub repositories

This package is not used by any popular GitHub repositories.

Version Downloads Last updated
2.0.0-preview.3 203 5/11/2022
2.0.0-preview.2 90 2/13/2022
2.0.0-preview.1 103 1/26/2022
2.0.0-beta7 240 9/29/2021
2.0.0-beta6 248 5/10/2021
2.0.0-beta5 606 2/16/2021
2.0.0-beta4 1,886 6/24/2020
2.0.0-beta3 481 6/22/2020
2.0.0-beta2 527 6/22/2020
2.0.0-beta1 500 5/6/2020
2.0.0-beta 519 4/28/2020
1.2.1-beta2 495 4/28/2020
1.2.1-beta1 480 4/28/2020
1.2.0 1,703 3/30/2020
1.1.0 887 3/23/2020
1.0.3 889 2/26/2020
1.0.2 912 2/19/2020

(preview packages available on nuget)
[Conversion extensions for BioCollections]()
BLAST biocontainer :
full blastn, blastn-short, megablast, and dc-megablast DSLs
full blastp, blastp-fast, and blastp-short DSLs
TargetP BioContainer :
Add functions to run the container with a mounted directory
OBO parser: Extended term parser for spec 1.4
OBO parser now correctly parses lists of relationships
FastA.writeToStream is now correctly typed and doe snot close the stream after writing