BioFSharp.IO
1.1.0
See the version list below for details.
dotnet add package BioFSharp.IO --version 1.1.0
NuGet\Install-Package BioFSharp.IO -Version 1.1.0
<PackageReference Include="BioFSharp.IO" Version="1.1.0" />
paket add BioFSharp.IO --version 1.1.0
#r "nuget: BioFSharp.IO, 1.1.0"
// Install BioFSharp.IO as a Cake Addin
#addin nuget:?package=BioFSharp.IO&version=1.1.0
// Install BioFSharp.IO as a Cake Tool
#tool nuget:?package=BioFSharp.IO&version=1.1.0
BioFSharp.IO contains read/write functions for a diverse set of biological
file formats such as Fasta, FastQ, GeneBank or GFF, as well as
helper function for searching on or transforming the input data
Product | Versions |
---|---|
.NET | net5.0 net5.0-windows net6.0 net6.0-android net6.0-ios net6.0-maccatalyst net6.0-macos net6.0-tvos net6.0-windows net7.0 net7.0-android net7.0-ios net7.0-maccatalyst net7.0-macos net7.0-tvos net7.0-windows |
.NET Core | netcoreapp2.0 netcoreapp2.1 netcoreapp2.2 netcoreapp3.0 netcoreapp3.1 |
.NET Standard | netstandard2.0 netstandard2.1 |
.NET Framework | net45 net451 net452 net46 net461 net462 net463 net47 net471 net472 net48 net481 |
MonoAndroid | monoandroid |
MonoMac | monomac |
MonoTouch | monotouch |
Tizen | tizen40 tizen60 |
Xamarin.iOS | xamarinios |
Xamarin.Mac | xamarinmac |
Xamarin.TVOS | xamarintvos |
Xamarin.WatchOS | xamarinwatchos |
-
- BioFSharp (>= 1.1.0)
- FSharp.Core (>= 4.7.0)
- FSharpAux (>= 1.0.0)
- FSharpAux.IO (>= 1.0.0)
- NewtonSoft.Json (>= 12.0.3)
NuGet packages (6)
Showing the top 5 NuGet packages that depend on BioFSharp.IO:
Package | Downloads |
---|---|
BioFSharp.ML
Machine learning with BioFSharp and CNTK.Net. |
|
BioFSharp.BioContainers
Open source bioinformatics and computational biology toolbox written in F#. |
|
BIO-BTE-06-L-7_Aux
Auxiliary functions for the course BIO-BTE-06-L-7 |
|
ProteomIQon
ProteomIQon - computational proteomics |
|
BioFSharp.Mz
BioFSharp.Mz - modular computational proteomics |
GitHub repositories
This package is not used by any popular GitHub repositories.
Version | Downloads | Last updated |
---|---|---|
2.0.0-preview.3 | 175 | 5/11/2022 |
2.0.0-preview.2 | 91 | 2/13/2022 |
2.0.0-preview.1 | 98 | 1/26/2022 |
2.0.0-beta6 | 281 | 5/10/2021 |
2.0.0-beta5 | 537 | 2/16/2021 |
2.0.0-beta4 | 1,379 | 6/24/2020 |
2.0.0-beta3 | 387 | 6/22/2020 |
2.0.0-beta2 | 447 | 6/22/2020 |
2.0.0-beta1 | 404 | 5/6/2020 |
2.0.0-beta | 412 | 4/28/2020 |
1.2.1-beta2 | 397 | 4/28/2020 |
1.2.1-beta1 | 396 | 4/28/2020 |
1.2.0 | 1,486 | 3/30/2020 |
1.1.0 | 695 | 3/23/2020 |
1.0.3 | 709 | 2/26/2020 |
1.0.2 | 727 | 2/19/2020 |
Additions:**
BioFSharp.BioContainers:**
Add [fasterq-dump](https://github.com/CSBiology/BioFSharp/commit/425fbb93b41700eeece8f8ab063c9c37b15124bd) and [prefetch](https://github.com/CSBiology/BioFSharp/commit/b08f307f203eea4c2a84cce10f1a72d05453806b) DSL for the SRATools biocontainer
Add full [STAR](https://github.com/alexdobin/STAR) RNASeq aligner DSL for the respective BioContainer. [Commit details](https://github.com/CSBiology/BioFSharp/commit/d2cbc0a8691564a487d70d9825867e7eb261d03a)
BioFSharp.IO:**
[Add load script for referencing pretty printers](https://github.com/CSBiology/BioFSharp/commit/130e1c63264989978e54f114dbd04b6dfb9458d3), included in the nuget package
[Add multiple new pretty printers for SOFT](https://github.com/CSBiology/BioFSharp/commit/97cca9bd06f63455ebafbf3cbb8029a0651137cb)
Bugfixes:**
BioFSharp.IO:**
[Fix GFF3 pretty printer return type](https://github.com/CSBiology/BioFSharp/commit/bcec2cc719eef7e43827521bd281582a8b5ebe72)