BioFSharp.BioContainers
2.0.0-beta5
See the version list below for details.
dotnet add package BioFSharp.BioContainers --version 2.0.0-beta5
NuGet\Install-Package BioFSharp.BioContainers -Version 2.0.0-beta5
<PackageReference Include="BioFSharp.BioContainers" Version="2.0.0-beta5" />
paket add BioFSharp.BioContainers --version 2.0.0-beta5
#r "nuget: BioFSharp.BioContainers, 2.0.0-beta5"
// Install BioFSharp.BioContainers as a Cake Addin #addin nuget:?package=BioFSharp.BioContainers&version=2.0.0-beta5&prerelease // Install BioFSharp.BioContainers as a Cake Tool #tool nuget:?package=BioFSharp.BioContainers&version=2.0.0-beta5&prerelease
BioFSharp.BioContainers gives you the possibility to leverage containerized applications without
leaving you F# environment. We build on the fondation of Docker.DotNet to programmatically access
the the REST API on top of the docker daemon. We provide special functions to use with biocontainers,
which is a standardized way to create containerized bioinformatic software.
Product | Versions Compatible and additional computed target framework versions. |
---|---|
.NET | net5.0 was computed. net5.0-windows was computed. net6.0 was computed. net6.0-android was computed. net6.0-ios was computed. net6.0-maccatalyst was computed. net6.0-macos was computed. net6.0-tvos was computed. net6.0-windows was computed. net7.0 was computed. net7.0-android was computed. net7.0-ios was computed. net7.0-maccatalyst was computed. net7.0-macos was computed. net7.0-tvos was computed. net7.0-windows was computed. net8.0 was computed. net8.0-android was computed. net8.0-browser was computed. net8.0-ios was computed. net8.0-maccatalyst was computed. net8.0-macos was computed. net8.0-tvos was computed. net8.0-windows was computed. |
.NET Core | netcoreapp2.0 was computed. netcoreapp2.1 was computed. netcoreapp2.2 was computed. netcoreapp3.0 was computed. netcoreapp3.1 was computed. |
.NET Standard | netstandard2.0 is compatible. netstandard2.1 was computed. |
.NET Framework | net45 is compatible. net451 was computed. net452 was computed. net46 was computed. net461 was computed. net462 was computed. net463 was computed. net47 is compatible. net471 was computed. net472 was computed. net48 was computed. net481 was computed. |
MonoAndroid | monoandroid was computed. |
MonoMac | monomac was computed. |
MonoTouch | monotouch was computed. |
Tizen | tizen40 was computed. tizen60 was computed. |
Xamarin.iOS | xamarinios was computed. |
Xamarin.Mac | xamarinmac was computed. |
Xamarin.TVOS | xamarintvos was computed. |
Xamarin.WatchOS | xamarinwatchos was computed. |
-
- BioFSharp (>= 2.0.0-beta5)
- BioFSharp.IO (>= 2.0.0-beta5)
- Docker.dotnet (= 3.125.2)
- FSharp.Core (>= 4.7.0)
- FSharpAux (>= 1.0.0)
- FSharpAux.IO (>= 1.0.0)
- SharpZipLib (>= 1.2.0)
NuGet packages
This package is not used by any NuGet packages.
GitHub repositories
This package is not used by any popular GitHub repositories.
Version | Downloads | Last updated |
---|---|---|
2.0.0-preview.3 | 159 | 5/11/2022 |
2.0.0-preview.2 | 118 | 2/13/2022 |
2.0.0-preview.1 | 125 | 1/26/2022 |
2.0.0-beta6 | 187 | 5/10/2021 |
2.0.0-beta5 | 210 | 2/16/2021 |
2.0.0-beta4 | 350 | 6/24/2020 |
2.0.0-beta3 | 320 | 6/22/2020 |
2.0.0-beta2 | 341 | 6/22/2020 |
2.0.0-beta1 | 322 | 5/6/2020 |
2.0.0-beta | 315 | 4/28/2020 |
1.2.1-beta2 | 362 | 4/28/2020 |
1.2.1-beta1 | 311 | 4/28/2020 |
1.2.0 | 579 | 3/30/2020 |
1.1.0 | 505 | 3/23/2020 |
1.0.3 | 544 | 2/26/2020 |
1.0.2 | 448 | 2/19/2020 |
(preview packages available on nuget)
Additions:**
BioFSharp**:
[Breaking] [Conversion extensions for BioCollections]()
BioFSharp.BioContainers**
BLAST biocontainer :
full blastn, blastn-short, megablast, and dc-megablast DSLs
[Breaking] full blastp, blastp-fast, and blastp-short DSLs
TargetP BioContainer :
Add functions to run the container with a mounted directory
BioFSharp.IO**:
OBO parser: Extended term parser for spec 1.4
OBO parser: fix (#111)[https://github.com/CSBiology/BioFSharp/issues/111]
SOFT parser now parses Data tables
Bugfixes:**
BioFSharp.IO**:
OBO parser now correctly parses lists of relationships
[Breaking] FastA.writeToStream is now correctly typed and does not close the stream after writing
SOFT parser now parses sample_label / sample_label_protocol correctly_