GenomeCalculator 1.0.0

GenomeCalculator

A nuget package that reads .fasta files and do some bioinformatic calculations.

To implement the nuget use namespaces: using GenomeCalculator; using GenomeCalculator.Implentation;

This class library reads fasta or any textfile that contains a DNA sequence. The nuget calculates a gene's GC composition, helpful to determine the gene's quality. Also the sequence's baselength can calculated.

Examples

        Example: 1 ==> Generate the basepairlength
        
        string filepath = @"C:\Users\...\sequence.fasta";
        Context myDNA = new Context(operation: new Length());
        double result = myDNA.execute(filepath);
        Console.WriteLine("DNA ==> " + result );
        
        
        Example: 2 ==> Generate the GC ration
        
        string filepath = @"C:\Users\...\sequence.fasta";
        Context myDNA = new Context(operation: new Ratio());
        double result = myDNA.execute(filepath);
        Console.WriteLine("DNA ==> " + result );